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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015922685.1_cds_XP_016471443.1_63784
CDS Infomation

[gene=LOC107793580] [db_xref=GeneID:107793580] [protein=cleavage and polyadenylation specificity factor subunit 2-like] [protein_id=XP_016471443.1] [location=join(12914..13062,13238..13406,14174..14270,14504..14630,14719..14834,15259..15353,15437..15588,16542..16596,16673..16780,17216..17468,18863..19047,19981..20073,24303..24401,26211..26342,26432..26476,26900..27067,27175..27249,27367..27468)] [gbkey=CDS]
Sequence

ATGGGAACGTCGGTTCAGGTGACGCCACTCTGTGGAGTGTATAACGAGAACCCTCTCTCT
TACCTCGTCTCTATCGACGGCTTCAATTTCCTCATCGATTGTGGTTGGAATGACCAATTT
GATACTTCTCTTCTTCAGCCCCTTTCCAGGGTGGCTTCAAGTGTGGATGCTGTATTGCTA
TCACACCCTGATACATTTCATCTTGGTGCTTTGCCCTATGCTGTGAAACAACTTGGTCTT
TCCGCTCCTATTTATGCTACAGAACCAGTGTACAGACTAGGGTTACTAACTATGTACGAT
CAGTATCTCTCACGGAAGCAAGTTTCAGAGTTTGATCTATTCACTTTGGATGACATTGAT
TCTGCATTCCAAAATGTGACCAGATTAACCTACTCTCAAAATCATTACATGTCTGGAAAA
GGAGAAGGGATTGTTATTGCTCCACTGGTAGCTGGTCATCTGTTGGGAGGTACTACATGG
AAGATAACAAAAGATGGGGAGGATGTCATATACGCTGTTGACTTCAATCACCGTAAAGAA
AGACATCTGAATGGAACTGTTTTAGAGTCTTTTGTCCGTCCAGCTGTTCTAATAACGGAT
GCCTTTAATGCTTTAAACAATCAACCCTCTAGGCGCCAAAGGGACCAAGAGTTTCTAGAT
GCCATAGAGAAAACTGTAAATGTTGGGGGAAATGTATTACTTCCTGTTGATACTGCTGGT
AGAGTTTTGGAGCTCATCTTGACGTTGGAACAGCACTGGACGCAAAAGCAGTTGTCGACT
CCCATCTTCTTCCTCTCATATGTAGCATCAAGTACTGTTGACTATGCGAAGAGTTTCCTT
GAGTGGATGAGCGATTCAATTGCAAAATCTTTTGAGCACACTCGGGACAATGCTTTTTTA
TTAAGGAAAATTAAGCTCGTGATTAACAAGAGTGGTCTTGAAGAAGTTCCTGGGCCAAAG
GTTGTTATGGCTTCCATGGCCAGTTTAGAAGCTGGATATTCGCATGACATCTTTGTTGAA
TGGGCAGCTGATCCAAAGAATCTTGTTTTGTTCACTGAAAGAGGGCAGTTTGGCACATTG
GCACGCATTCTTCAGTCAAATCCACCTCCTAAAGCTGTTAAAGTTACTATGTCAAGGAGA
ATTCCCTTGGTTGATGAGGAGTTAGCCGCTTATGAGGAGGAGCAAAACAGGATAAAAAGG
GAAGAAGCTCTCAAAGCTACTCTTATTAAAGAGGAGGAATCAAAAGCGCCTATTGGGGCC
GAAGTCATCACTGGTGACCCAATGGTCATTGATGCCAATGTCACACATGCTTCCTCCAAT
GCTGCTGGTCCATACAGTGGTGCTTTCAAGGATGTCTTGATTGATGGATTTGTTCCACCT
TCATCTAGCGTAGCTCCAATGTTCCCTTTCTATGATAACACCTCCGAGTGGGATGACTTT
GGTGAAGTCATCAATCCAGATGATTATGTGATCAAAGATGACAACATGGAGCAGTCGTCA
ATGCATGTTGATGGAGATCTAAATGGAAACCTTGATGAAGGATCAGCAAATCTAATCCTT
GATTCAACGCCCTCAAAAGTTGTATCGTCAGAGTTAACGGTACAAGTCAAGTGTTCCTTA
TTATACGTGGATTTTGAAGGTCGTTCAGATGGCCGCTCAATCAAATCAATTCTTGCTCAT
GTTGCGCCCTTAAAGCTTGTGTTGGTGCATGGATCAGCTGAAGCCACTGAGCATCTGAAG
CAACATTGTCTGAAACAAGTTTGTCCGCATGTTTACGCTCCCCAGTTAGAAGAAACAATT
GATGTCACTTCAGATTTGTGTGCTTATAAGGTCCAACTTTCTGAGAAGCTAATGAGCAAA
GTGCTCTTTAAGAAGCTTGGAGACCATGAAATAGCATGGGTTGATGCTGAAGTGGGGAAG
ACAGAAAATGGCATGATCTCTTTACTTCCTTTCTCGGGACCCGCTCCCCCGCATAAAACA
GTTCTCGTCGGAGATATAAAAATGTCCGATTTCAAGCAGTTTCTCGCCAGCAAGGGCGTC
CAGGTAGAATTTGCTGGTGGTGCTTTACGTTGTGGGGAGTATGTGACCATTCGCAAAGTT
GGAGATGCTAGTCAAAAGGTTGGAGGTGCCGCTATTCAGCAGATCGTGCTTGAAGGTCCA
TTATCTGAAGAGTACTATAAAATTCGAGAATACCTATATTCACATTTTTATTCCCTCTAA

Peptide Sequence

PEP ID

XP_016471443.1
PEP Infomation

PREDICTED: cleavage and polyadenylation specificity factor subunit 2-like [Nicotiana tabacum]
Sequence

MGTSVQVTPLCGVYNENPLSYLVSIDGFNFLIDCGWNDQFDTSLLQPLSRVASSVDAVLL
SHPDTFHLGALPYAVKQLGLSAPIYATEPVYRLGLLTMYDQYLSRKQVSEFDLFTLDDID
SAFQNVTRLTYSQNHYMSGKGEGIVIAPLVAGHLLGGTTWKITKDGEDVIYAVDFNHRKE
RHLNGTVLESFVRPAVLITDAFNALNNQPSRRQRDQEFLDAIEKTVNVGGNVLLPVDTAG
RVLELILTLEQHWTQKQLSTPIFFLSYVASSTVDYAKSFLEWMSDSIAKSFEHTRDNAFL
LRKIKLVINKSGLEEVPGPKVVMASMASLEAGYSHDIFVEWAADPKNLVLFTERGQFGTL
ARILQSNPPPKAVKVTMSRRIPLVDEELAAYEEEQNRIKREEALKATLIKEEESKAPIGA
EVITGDPMVIDANVTHASSNAAGPYSGAFKDVLIDGFVPPSSSVAPMFPFYDNTSEWDDF
GEVINPDDYVIKDDNMEQSSMHVDGDLNGNLDEGSANLILDSTPSKVVSSELTVQVKCSL
LYVDFEGRSDGRSIKSILAHVAPLKLVLVHGSAEATEHLKQHCLKQVCPHVYAPQLEETI
DVTSDLCAYKVQLSEKLMSKVLFKKLGDHEIAWVDAEVGKTENGMISLLPFSGPAPPHKT
VLVGDIKMSDFKQFLASKGVQVEFAGGALRCGEYVTIRKVGDASQKVGGAAIQQIVLEGP
LSEEYYKIREYLYSHFYSL

Transcript Sequence

Gene sequence data has not been registered.